MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Borrelia burgdorferi JD1 plasmid JD1 lp28-6

Total Repeats: 55

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017408	TAT	2	6	5	10	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017408	AAGAT	2	10	22	31	60 %	20 %	20 %	0 %	Non-Coding
3	NC_017408	AAATA	2	10	51	60	80 %	20 %	0 %	0 %	Non-Coding
4	NC_017408	ATT	2	6	74	79	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_017408	ATA	2	6	111	116	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017408	TTATAC	2	12	1953	1964	33.33 %	50 %	0 %	16.67 %	Non-Coding
7	NC_017408	TTC	2	6	1966	1971	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_017408	AAT	2	6	1975	1980	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017408	TCT	2	6	2013	2018	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_017408	ACT	2	6	2057	2062	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_017408	TAG	2	6	2088	2093	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_017408	AAT	2	6	2106	2111	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017408	TAG	2	6	2136	2141	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_017408	ATA	2	6	2218	2223	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017408	TAT	2	6	2224	2229	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_017408	T	7	7	2888	2894	0 %	100 %	0 %	0 %	Non-Coding
17	NC_017408	GTC	2	6	2911	2916	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
18	NC_017408	ATT	2	6	2930	2935	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_017408	CCA	2	6	2944	2949	33.33 %	0 %	0 %	66.67 %	Non-Coding
20	NC_017408	TAA	2	6	5200	5205	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_017408	TAT	2	6	5208	5213	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_017408	AATT	2	8	5228	5235	50 %	50 %	0 %	0 %	Non-Coding
23	NC_017408	ATA	2	6	5265	5270	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017408	GAA	2	6	5271	5276	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_017408	TAA	2	6	5328	5333	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017408	TA	3	6	5359	5364	50 %	50 %	0 %	0 %	Non-Coding
27	NC_017408	AGT	2	6	5385	5390	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_017408	T	7	7	5398	5404	0 %	100 %	0 %	0 %	Non-Coding
29	NC_017408	T	7	7	5408	5414	0 %	100 %	0 %	0 %	Non-Coding
30	NC_017408	GCTCTC	2	12	8708	8719	0 %	33.33 %	16.67 %	50 %	Non-Coding
31	NC_017408	GTTC	2	8	8743	8750	0 %	50 %	25 %	25 %	Non-Coding
32	NC_017408	AAAC	2	8	8758	8765	75 %	0 %	0 %	25 %	Non-Coding
33	NC_017408	GCC	2	6	8786	8791	0 %	0 %	33.33 %	66.67 %	Non-Coding
34	NC_017408	T	9	9	8952	8960	0 %	100 %	0 %	0 %	Non-Coding
35	NC_017408	CCT	2	6	12268	12273	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_017408	T	7	7	12275	12281	0 %	100 %	0 %	0 %	Non-Coding
37	NC_017408	CCT	2	6	13358	13363	0 %	33.33 %	0 %	66.67 %	Non-Coding
38	NC_017408	AAATT	2	10	13366	13375	60 %	40 %	0 %	0 %	Non-Coding
39	NC_017408	AGA	2	6	22105	22110	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_017408	T	8	8	22113	22120	0 %	100 %	0 %	0 %	Non-Coding
41	NC_017408	A	9	9	22123	22131	100 %	0 %	0 %	0 %	Non-Coding
42	NC_017408	AAT	2	6	22169	22174	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_017408	T	6	6	22257	22262	0 %	100 %	0 %	0 %	Non-Coding
44	NC_017408	AAT	2	6	22274	22279	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017408	T	8	8	22286	22293	0 %	100 %	0 %	0 %	Non-Coding
46	NC_017408	A	6	6	22295	22300	100 %	0 %	0 %	0 %	Non-Coding
47	NC_017408	GAAA	2	8	22378	22385	75 %	0 %	25 %	0 %	Non-Coding
48	NC_017408	GTA	2	6	24373	24378	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
49	NC_017408	A	8	8	24403	24410	100 %	0 %	0 %	0 %	Non-Coding
50	NC_017408	GTT	2	6	24412	24417	0 %	66.67 %	33.33 %	0 %	Non-Coding
51	NC_017408	ACT	2	6	24421	24426	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_017408	T	6	6	24456	24461	0 %	100 %	0 %	0 %	Non-Coding
53	NC_017408	A	6	6	24463	24468	100 %	0 %	0 %	0 %	Non-Coding
54	NC_017408	TA	3	6	26822	26827	50 %	50 %	0 %	0 %	Non-Coding
55	NC_017408	TTA	2	6	26947	26952	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.